The detailed information of tRNA gene sequence


Sequence ID>SRA1006182
Genome IDSRR016610.162182
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 128
End posion on genome 212
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
ggtccttcgt
tRNA gene sequence 
GCGGGCGTGGCGGAATTGGTAGACGCAGCAGGTTTAGGTCCTGCCATCGCAAGATGTGGG
GGTTCGAGTCCCTTCGCCCGCACCA
Downstream region at tRNA end position 
gtcccgcgct
Secondary structure (Cloverleaf model)
>SRA1006182	Leu	TAG
                   t      ACCA gtcccgcgct
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T T C C C     A
      T A A        G      + + | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CATCGCAAGATGT
                    G - C
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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