The detailed information of tRNA gene sequence


Sequence ID>SRA1006195
Genome IDSRR016610.223861
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 183
End posion on genome 99
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
atcaagactt
tRNA gene sequence 
GCCGTCGTGGTGAAATTGGTAGACACGCTATCTTGGGGGGGTAGTGGCGAAAGCTGTGCG
AGTTCGAGTCTCGCCGACGGCACCA
Downstream region at tRNA end position 
agatataact
Secondary structure (Cloverleaf model)
>SRA1006195	Pro	GGG
                   t      ACCA agatataact
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     C - G
                     G - C          T G
                    T     C G C T C     A
      T A A        G      | | | | |     G
    T       A G T G       G C G A G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGGCGAAAGCTGT
                    C - G
                    T - A
                    A - T
                    T + G
                    C - G
                  T       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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