The detailed information of tRNA gene sequence


Sequence ID>SRA1006207
Genome IDSRR016610.256497
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 5
End posion on genome 79
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
nnnnnnttat
tRNA gene sequence 
GCCTCCGTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTGGGTCGCACGTTCGAG
TCGTGCCGGGGGTGCtt
Downstream region at tRNA end position 
tttttgcttg
Secondary structure (Cloverleaf model)
>SRA1006207	Arg	TCT
                   t      GCtt tttttgcttg
                     G + T
                     C - G
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C          T G
                    T     C G T G C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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