The detailed information of tRNA gene sequence


Sequence ID>SRA1006211
Genome IDSRR016610.267604
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 138
End posion on genome 62
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aaaaaagcaa
tRNA gene sequence 
CGGGGTGTAGCTTAGCCTGGTAGAGCGCTACGTTCGGGACGTAGAGGCCGGAGGTTCGAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
tttctggtca
Secondary structure (Cloverleaf model)
>SRA1006211	Pro	CGG
                   a      ACCA tttctggtca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       T T C G       G G A G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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