The detailed information of tRNA gene sequence


Sequence ID>SRA1006213
Genome IDSRR016610.294728
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 102
End posion on genome 27
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catagttaag
tRNA gene sequence 
GGGCCTGTAGCTCAATGGTTAGAGCTACCGGCTCATAACCGGTAGGTTCCTGGTTCGAAT
CCAGGCAGGCCCACTA
Downstream region at tRNA end position 
tttacagtga
Secondary structure (Cloverleaf model)
>SRA1006213	Met	CAT
                   g      ACTA tttacagtga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     G G A C C     A
      T A A        A      | | | | |     G
    G       C T C G       C C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     AGGTT
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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