The detailed information of tRNA gene sequence


Sequence ID>SRA1006219
Genome IDSRR016610.313319
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 138
End posion on genome 62
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taggtcttac
tRNA gene sequence 
GGCGCTTTAGCTCAGTCGGTTAGAGCGATGGAATCATAATCCACAGGTCCGCGGTTCGAA
TCCGTGAAGCGCCACCA
Downstream region at tRNA end position 
aacaaagaaa
Secondary structure (Cloverleaf model)
>SRA1006219	Met	CAT
                   c      ACCA aacaaagaaa
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T A
                    T     G T G C C     A
      T G A        A      | + | | |     G
    C       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A   C
                    T - A
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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