The detailed information of tRNA gene sequence


Sequence ID>SRA1006220
Genome IDSRR016610.315834
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 81
End posion on genome 154
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ataggcacgT
tRNA gene sequence 
TCCCCTGTAGCTCAGCGGTAGAGTAGGTGACTGTTAATCACTGGGTCGCTGGTTCGAATC
CAGCCGGGGGAGTta
Downstream region at tRNA end position 
aaaaaggttg
Secondary structure (Cloverleaf model)
>SRA1006220	Asn	GTT
                   T      GTta aaaaaggttg
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C G A C C     A
        G A        A      | | | | |     G
      C     C T C G       G C T G G     C
      G     | | | +                 T T
      G     G A G T
        T A        A     GGGTC
                    G + T
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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