The detailed information of tRNA gene sequence


Sequence ID>SRA1006224
Genome IDSRR020488.374
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 218
End posion on genome 142
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gaatattttt
tRNA gene sequence 
GGGCTGGTAGCTCAGCCGGTTAGAGCGCTACTCTGATAAAGTAGAGGTCGGATGTTCGAG
TCATCCTCAGCCCACCA
Downstream region at tRNA end position 
tctcaattca
Secondary structure (Cloverleaf model)
>SRA1006224	Ile	GAT
                   t      ACCA tctcaattca
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     G + T          T G
                    T     C C T A C     A
      C G A        A      | | | | |     G
    C       C T C G       G G A T G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    T - A
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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