The detailed information of tRNA gene sequence


Sequence ID>SRA1006230
Genome IDSRR020488.4093
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 155
End posion on genome 71
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggtcaacact
tRNA gene sequence 
GCGGACGTCGCTTAGCCTGGTAGAGCGCCGGATTTGAAATCCGGTGGTATTCGCCTCGGG
AGTTCAAATCTCTCCGTCCGCGCCA
Downstream region at tRNA end position 
acactaatac
Secondary structure (Cloverleaf model)
>SRA1006230	Ser	TGA
                   t      GCCA acactaatac
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C T C     A
      C G A        C      | + | | |     A
    C       T T C G       G G G A G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     TGGTATTCGCCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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