The detailed information of tRNA gene sequence


Sequence ID>SRA1006237
Genome IDSRR020488.8994
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 1
End posion on genome 87
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTTAAGGCGCACGCTTGGAAAGCGTGTATATGGACAACATAT
CGGGGGTTCGAATCCCTTTCTCTCCGCtg
Downstream region at tRNA end position 
ttgtagacag
Secondary structure (Cloverleaf model)
>SRA1006237	Ser	GGA
                   n      GCtg ttgtagacag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T T C C C     A
      T G A        G      + + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TATATGGACAACATATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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