The detailed information of tRNA gene sequence


Sequence ID>SRA1006258
Genome IDSRR020488.21177
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 116
End posion on genome 23
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
caaattggaa
tRNA gene sequence 
GGTCCTGTAGTTTAACGGTAAAACACCCGGCTTATACTCGGCATAGTCTCCAGATTAGAG
AGCGATCCTGGTTCGAATCCAGGCGGGACCACCA
Downstream region at tRNA end position 
attttgataa
Secondary structure (Cloverleaf model)
>SRA1006258	Ile	TAT
                   a      ACCA attttgataa
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     G G A C C     A
        A A        A      | | | | |     G
      C     T T T G       C C T G G     C
      G     | | | |                 T T
      G     A A A C
        T A        A     ATAGTCTCCAGATTAGAGAGCGAT
                    C   C
                    C - G
                    C - G
                    G - C
                    G + T
                  C       C
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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