The detailed information of tRNA gene sequence


Sequence ID>SRA1006270
Genome IDSRR020488.23284
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 214
End posion on genome 141
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
attttatatT
tRNA gene sequence 
GCCGATATAGCTCAGCGGAAGAGCAACTGTCTCGTAAACAGTAGGTCATTGGTTCAATTC
CGATTATCGGCATtt
Downstream region at tRNA end position 
atgtttggaa
Secondary structure (Cloverleaf model)
>SRA1006270	Thr	CGT
                   T      ATtt atgtttggaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T          T T
                    T     T A G C C     A
        G A        A      | | + | |     A
      C     C T C G       A T T G G     C
      G     | | | |                 T T
      G     G A G C
        A A        A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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