The detailed information of tRNA gene sequence


Sequence ID>SRA1006271
Genome IDSRR020488.23370
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 122
End posion on genome 31
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtcttttcat
tRNA gene sequence 
GGAGGGATCGCATAGTCTGGCCTAGTGCGCACGCTTGGAAAGCGTGTAAGGGTTTATCCC
CTTCGAGGGTTCGAATCCCTCTCCCTCCGCAA
Downstream region at tRNA end position 
aaagatttta
Secondary structure (Cloverleaf model)
>SRA1006271	Ser	GGA
                   t      GCAA aaagatttta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        C      | | | | |     G
  T         T A C G       G A G G G     C
  G         + | | |                 T T
  G         G T G C
    C C T A        G     TAAGGGTTTATCCCCTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK