The detailed information of tRNA gene sequence


Sequence ID>SRA1006272
Genome IDSRR020488.23790
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 172
End posion on genome 93
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcggtgaggT
tRNA gene sequence 
AGCGAGTTGGAGTAGTCAGGTTATCTCGTCGGGCTCATAACCCGGAGACCGGTGGTTCAA
ATCCACCACTCGCTAACC
Downstream region at tRNA end position 
Aaaaaaagta
Secondary structure (Cloverleaf model)
>SRA1006272	Met	CAT
                   T      AACC Aaaaaaagta
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C C A C C     A
    C T G A        G      | | | | |     A
  A         T G A G       G G T G G     C
  G           | | |                 T T
  G         T C T C
    T T A          G     AGACC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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