The detailed information of tRNA gene sequence


Sequence ID>SRA1006273
Genome IDSRR020488.24296
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 166
End posion on genome 90
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttcgaaattT
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGTAGAGCACCTGCATGGCATGCAGGGGGTCAGCGGTTCGAGT
CCGCTTGGTTCCATCA
Downstream region at tRNA end position 
ggattttcgc
Secondary structure (Cloverleaf model)
>SRA1006273	Ala	GGC
                   T      ATCA ggattttcgc
                     G - C
                     G - C
                     G + T
                     G + T
                     C - G
                     C - G
                     A - T          T G
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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