The detailed information of tRNA gene sequence


Sequence ID>SRA1006275
Genome IDSRR020488.24866
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 162
End posion on genome 87
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gcagtttaat
tRNA gene sequence 
GCTAACGTAGCTCAACTGGTAGAGCAGCTGATTTGTAATCAGCAGGCTGGGGGTTCAAGT
CCTCTCGTTAGCTCCA
Downstream region at tRNA end position 
agcgagtatc
Secondary structure (Cloverleaf model)
>SRA1006275	Thr	TGT
                   t      TCCA agcgagtatc
                     G - C
                     C - G
                     T - A
                     A - T
                     A - T
                     C - G
                     G - C          T G
                    T     T C T C C     A
      C A A        A      + | + | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGCT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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