The detailed information of tRNA gene sequence


Sequence ID>SRA1006288
Genome IDSRR020488.31161
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 206
End posion on genome 133
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
aatttttatT
tRNA gene sequence 
GCCGATATAGCTCAGAGGTAGAGCAACTGTCTCGTAAACAGTGGGTCGTTGGTTCAATTC
CAATTATCGGCATtt
Downstream region at tRNA end position 
taaaagtata
Secondary structure (Cloverleaf model)
>SRA1006288	Thr	CGT
                   T      ATtt taaaagtata
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T          T T
                    T     T A A C C     A
        G A        A      + | | | |     A
      A     C T C G       G T T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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