The detailed information of tRNA gene sequence


Sequence ID>SRA1006301
Genome IDSRR020488.35675
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 144
End posion on genome 229
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aataattttt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTTAAGGCGCACGCTTGGAAAGCGTGTAGAACGCAAGTTCAC
GCAGGTTCGAATCCTGTCCTCTCCGCac
Downstream region at tRNA end position 
tatcttttcc
Secondary structure (Cloverleaf model)
>SRA1006301	Ser	GGA
                   t      GCac tatcttttcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TAGAACGCAAGTTCAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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