The detailed information of tRNA gene sequence


Sequence ID>SRA1006329
Genome IDSRR020488.49269
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 75
End posion on genome 1
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ataaacgctt
tRNA gene sequence 
AGGAGCGTAGTTCAATTGGTAGAGCGCCGGTCTCCAAAACCGGAGGTTGTGGGTTCGAGT
CCCTCCGCTCCTGCCn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1006329	Trp	CCA
                   t      GCCn nnnnnnnnnn
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      |   | | |     G
    T       C T T G       G T G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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