The detailed information of tRNA gene sequence


Sequence ID>SRA1006334
Genome IDSRR020488.51390
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 269
End posion on genome 196
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
taaagtcccc
tRNA gene sequence 
GCCCCGTTCGTCTAGCGGCCTAGGACGCCACCCTCTCAAGGTGGTAGCACGGGTTCAAAT
CCCGTACGGGGTACtt
Downstream region at tRNA end position 
attcgcttaa
Secondary structure (Cloverleaf model)
>SRA1006334	Glu	CTC
                   c      ACtt attcgcttaa
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      C G A        C      | | | | |     A
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     TAGC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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