The detailed information of tRNA gene sequence


Sequence ID>SRA1006354
Genome IDSRR020488.57896
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 131
End posion on genome 205
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaatagat
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCGAA
TCCTGCCCCCGCTACtt
Downstream region at tRNA end position 
tcgagatagc
Secondary structure (Cloverleaf model)
>SRA1006354	Met	CAT
                   t      ACtt tcgagatagc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     G
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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