The detailed information of tRNA gene sequence


Sequence ID>SRA1006399
Genome IDSRR020488.74397
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 214
End posion on genome 138
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atcttatgag
tRNA gene sequence 
CGGGGCGTGGCGCAGCTTGGTAGCGCGGGTGCTTTGGGAGCACTAGGTCGCAGGTTCGAA
TCCTGTCGCCCCGACCA
Downstream region at tRNA end position 
tttaaaacca
Secondary structure (Cloverleaf model)
>SRA1006399	Pro	TGG
                   g      ACCA tttaaaacca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     G
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    G + T
                    G - C
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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