The detailed information of tRNA gene sequence


Sequence ID>SRA1006436
Genome IDSRR020488.86219
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 245
End posion on genome 172
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agtcccttcT
tRNA gene sequence 
GATTCTATAGTTTAATGGTTAGAACGTGTCCCTGTCACGGACATAGTCGGGGTTCAACTC
CCCGTAGAATCGTtc
Downstream region at tRNA end position 
agcaaataat
Secondary structure (Cloverleaf model)
>SRA1006436	Asp	GTC
                   T      GTtc agcaaataat
                     G - C
                     A - T
                     T - A
                     T - A
                     C - G
                     T - A
                     A - T          T C
                    T     G C C C C     A
      T A A        A      | | | | |     A
    G       T T T G       C G G G G     C
    G       + | | |                 T T
    T       G A A C
      T A          G     TAGT
                    T - A
                    G - C
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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