The detailed information of tRNA gene sequence


Sequence ID>SRA1006457
Genome IDSRR020488.94675
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 89
End posion on genome 162
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttcacgatat
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGTAGAGCACCTGCATGGCATGCAGGGGGTCTGCGGTTCAAAT
CCGCATGGCTCCACtc
Downstream region at tRNA end position 
aattctttaa
Secondary structure (Cloverleaf model)
>SRA1006457	Ala	GGC
                   t      ACtc aattctttaa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     A C G C C     A
      C G A        A      | | | | |     A
    T       C T C G       T G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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