The detailed information of tRNA gene sequence


Sequence ID>SRA1006458
Genome IDSRR020488.95561
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 171
End posion on genome 98
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttatttgtat
tRNA gene sequence 
GGGGATATAGCTCAGTTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCAGCGGTTCGACC
CCGCTTATCTCCACag
Downstream region at tRNA end position 
aagaaaacta
Secondary structure (Cloverleaf model)
>SRA1006458	Ala	GGC
                   t      ACag aagaaaacta
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          C C
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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