The detailed information of tRNA gene sequence


Sequence ID>SRA1006467
Genome IDSRR020488.98725
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 225
End posion on genome 142
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtcaatttag
tRNA gene sequence 
GCGGAGATCGCATAGCCTGGTATTGCGGTGGACTTGAAATCCACTGTCCCCCGGACACGG
GAGTTCGAATCTCTCTCTCCGCGCtt
Downstream region at tRNA end position 
ctaaaatccg
Secondary structure (Cloverleaf model)
>SRA1006467	Ser	TGA
                   g      GCtt ctaaaatccg
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C T C     A
      C G A        C      | + | | |     G
    C       T A C G       G G G A G     C
    T         | | |                 T T
    G       T T G C
      G T A        G     TGTCCCCCGGACAC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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