The detailed information of tRNA gene sequence


Sequence ID>SRA1006471
Genome IDSRR020488.99820
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 95
End posion on genome 19
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acaatcagat
tRNA gene sequence 
CGCGGGATGGAGCAGCTTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGTAGGTTCAAA
TCCTACTCCCGCTACAA
Downstream region at tRNA end position 
acctccaaat
Secondary structure (Cloverleaf model)
>SRA1006471	Met	CAT
                   t      ACAA acctccaaat
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      C G A        G      | | | | |     A
    T       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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