The detailed information of tRNA gene sequence


Sequence ID>SRA1006482
Genome IDSRR020488.104057
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 119
End posion on genome 30
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtttattctt
tRNA gene sequence 
GGAGGGGTGGCAGAGTCTGGCTGAATGCACTGGTCTTGAAAACCAGCAAGGGTTTACGCC
CTTCGGGGGTTCGAATCCCTCCCCCTCCGCac
Downstream region at tRNA end position 
cttaattact
Secondary structure (Cloverleaf model)
>SRA1006482	Ser	TGA
                   t      GCac cttaattact
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    C T G A        A     CAAGGGTTTACGCCCTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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