The detailed information of tRNA gene sequence


Sequence ID>SRA1006501
Genome IDSRR020488.110498
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 142
End posion on genome 218
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cttctctcac
tRNA gene sequence 
GCGCCCATAGCTCAACTGGATAGAGCAACTGACTTCTAATCAGTAGGTTTCAGGTTCAAG
TCCTGATGGGCGCGCCA
Downstream region at tRNA end position 
ttaaaatcag
Secondary structure (Cloverleaf model)
>SRA1006501	Arg	TCT
                   c      GCCA ttaaaatcag
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     A G T C C     A
      C A A        A      | | | | |     A
    T       C T C G       T C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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