The detailed information of tRNA gene sequence


Sequence ID>SRA1006504
Genome IDSRR020488.112623
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 107
End posion on genome 31
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ggataaagta
tRNA gene sequence 
GGGCGCTTAGCTCAGTCCGGCAGAGCGCTTCCCTTACAAGGAAGAAGTCACAGGTTCAAA
TCCTGTAGCGCCCACAA
Downstream region at tRNA end position 
gggtttttca
Secondary structure (Cloverleaf model)
>SRA1006504	Val	TAC
                   a      ACAA gggtttttca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          T A
                    T     T G T C C     A
      T G A        A      | | | | |     A
    C       C T C G       A C A G G     C
    C       | | | |                 T T
    G       G A G C
      G C A        G     AAGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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