The detailed information of tRNA gene sequence


Sequence ID>SRA1006506
Genome IDSRR020488.112836
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 283
End posion on genome 193
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tataagaacT
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGCGGCTCCCTGCTAAGGAGTTACAGGAGGTAACTTT
TGTCGAGGGTTCGAATCCCTCCCTCTCCGTat
Downstream region at tRNA end position 
tattagaagt
Secondary structure (Cloverleaf model)
>SRA1006506	Ser	GCT
                   T      GTat tattagaagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TACAGGAGGTAACTTTTGTC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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