The detailed information of tRNA gene sequence


Sequence ID>SRA1006513
Genome IDSRR020488.116911
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 8
End posion on genome 91
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
nnnggtttgc
tRNA gene sequence 
GCGGGGGTCGCCCAGCTTGGTCAACGGCGGTGGGTTTAGGTCCCATTCCTTATCGGTTCG
CAGGTTCGAATCCTGCCCCCCGCAtcc
Downstream region at tRNA end position 
ctgcagtgcc
Secondary structure (Cloverleaf model)
>SRA1006513	Leu	TAG
                   c      Atcc ctgcagtgcc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
    T C G A        C      | | | | |     G
  T         C C C G       G C A G G     C
  G           | | |                 T T
  G         C G G C
    T C A A        G     TCCTTATCGGTTC
                    G + T
                    T - A
                    G - C
                    G - C
                    G - C
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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