The detailed information of tRNA gene sequence


Sequence ID>SRA1006525
Genome IDSRR020488.122797
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 248
End posion on genome 175
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cttttttaaa
tRNA gene sequence 
GGCTCGGTGGCAGAGTGGTGATGTAGGGGCCTGCAAAGCCTTGCACAGCGGTTCGATTCC
GCTCCGAGCCTCCA
Downstream region at tRNA end position 
gtttttcttg
Secondary structure (Cloverleaf model)
>SRA1006525	Cys	GCA
                   a      TCCA gtttttcttg
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T T
                    T     T C G C C     A
        G A        G      | | | | |     G
      T     G A C G       A G C G G     C
      G       | | +                 T T
      G     A T G T
        T G        A     GCAC
                    G + T
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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