The detailed information of tRNA gene sequence


Sequence ID>SRA1006527
Genome IDSRR020488.122831
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 100
End posion on genome 28
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ttaggaaaaa
tRNA gene sequence 
GCCCCGATAGTTAAATGGTATAACAGATCCATGGTAAGGATCAGTTTCCAGTTCAATTCT
GGGTCGGGCACCAa
Downstream region at tRNA end position 
ttaattttaa
Secondary structure (Cloverleaf model)
>SRA1006527	Thr	GGT
                   a      CCAa ttaattttaa
                     G   A
                     C   C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T T
                    T     G G G T C     A
        A A        A      + | | | |     A
      T     A T T G       T C C A G     C
      G     | | | |                 T T
      G     T A A C
        T A        A     AGTT
                    G - C
                    A - T
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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