The detailed information of tRNA gene sequence


Sequence ID>SRA1006529
Genome IDSRR020488.123161
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 55
End posion on genome 130
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tttaaaacat
tRNA gene sequence 
TGGGGCGTGGTAAAGTCTGGAGTTTACGCCTGCCTGTCACGCAGGAGGTCGCGGGTTCGA
ATCCCGTCGTCCCCGCtt
Downstream region at tRNA end position 
tacggccaga
Secondary structure (Cloverleaf model)
>SRA1006529	Asp	GTC
                   t      GCtt tacggccaga
                     T   C
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     T G C C C     A
    C T G A        G      + | | | |     G
  T         A A T G       G C G G G     C
  G         | | | |                 T T
  G         T T A C
    A G T          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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