The detailed information of tRNA gene sequence


Sequence ID>W1810503916
Genome IDQBKM01000004
Search identical group
Phylum/ClassBacteroidota
SpeciesPedobacter sp. YR016 [QBKM]
Start position on genome 1248
End posion on genome 1159
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcgagatac
tRNA gene sequence 
GGAGGGATGCCTGAGTGGCCGAAAGGAACAGTTTGCTAAACTGTCGTACTGGCAACGGTA
CCGAGGGTTCGAATCCCTCTTCCTCCGCCA
Downstream region at tRNA end position 
gacgggaagt
Secondary structure (Cloverleaf model)
>W1810503916	Ser	GCT
                   c      GCCA gacgggaagt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G A G G G     C
    G         | | |                 T T
    C       A A G G
      C G A        A     CGTACTGGCAACGGTACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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