The detailed information of tRNA gene sequence


Sequence ID>SRA1006537
Genome IDSRR020488.126542
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 105
End posion on genome 177
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
agtcggcctt
tRNA gene sequence 
GCCAGATTAGCTCGAGTGGTAGAGCAGTGCTTTTGTAAAGCAAAGGTCATCAGTTCAAAT
CTGTTATCTGGCTtgg
Downstream region at tRNA end position 
gaatattccc
Secondary structure (Cloverleaf model)
>SRA1006537	Thr	TGT
                   t      Ttgg gaatattccc
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T
                     T - A          T A
                    T     T T G T C     A
      G A G        A      |   | | |     A
    T       C T C G       A T C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    T - A
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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