The detailed information of tRNA gene sequence


Sequence ID>SRA1006546
Genome IDSRR020488.128404
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 23
End posion on genome 107
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
attgcgtagG
tRNA gene sequence 
GGGGGAGTACCAAAGCGGCCAACTGGGGCAGACTGTAAATCTGTTGACTTATGTCTTCGC
AGGTTCGAATCCTGCTCCCCCCACtt
Downstream region at tRNA end position 
agatgtatac
Secondary structure (Cloverleaf model)
>SRA1006546	Tyr	GTA
                   G      ACtt agatgtatac
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     A   C
                     G + T          T A
                    T     C G T C C     A
      C G A        A      | | | | |     G
    G       A A C C       G C A G G     C
    G         | | |                 T T
    C       C T G G
      C A A        G     TGACTTATGTCTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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