The detailed information of tRNA gene sequence


Sequence ID>SRA1006551
Genome IDSRR020488.130670
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 43
End posion on genome 118
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
attgtttgtt
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTAGAGCATCTCGTTTACACCGAGAGGGTCAGCGGTTCGAGC
CCGTTACCGCCCACCA
Downstream region at tRNA end position 
tataaggggg
Secondary structure (Cloverleaf model)
>SRA1006551	Val	TAC
                   t      ACCA tataaggggg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C G
                    T     T T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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