The detailed information of tRNA gene sequence


Sequence ID>SRA1006558
Genome IDSRR020488.131962
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 120
End posion on genome 43
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taattttata
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGTGGACTCATAATCCATTGGTCGGAGGTTCGAG
TCCTCCCCGGGCCCACC
Downstream region at tRNA end position 
Attttgtaaa
Secondary structure (Cloverleaf model)
>SRA1006558	Met	CAT
                   a      CACC Attttgtaaa
                     G - C
                     G - C
                     G   G
                     C - G
                     C - G
                     T   C
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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