The detailed information of tRNA gene sequence


Sequence ID>SRA1006560
Genome IDSRR020488.132914
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 96
End posion on genome 22
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tatagactgt
tRNA gene sequence 
GGGCGCGTAGCTCAGCGGGAGAGCACCTCGTTGACATCGAGGGGGTCACTGGTTCAATCC
CAGTCGTGCCCACCA
Downstream region at tRNA end position 
ttgaaaaaag
Secondary structure (Cloverleaf model)
>SRA1006560	Val	GAC
                   t      ACCA ttgaaaaaag
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     G - C          C T
                    T     T G A C C     A
        G A        A      | | | | |     A
      C     C T C G       A C T G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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