The detailed information of tRNA gene sequence


Sequence ID>SRA1006567
Genome IDSRR020488.134068
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 160
End posion on genome 85
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
caaaaattat
tRNA gene sequence 
CGGGGTATAGCGTAGTCCGGTTAACGCGCCTGCTTTGGGAGCAGGAGATCGGGAGTTCAA
ATCTCTCTACCCCGACac
Downstream region at tRNA end position 
tcgaaatcct
Secondary structure (Cloverleaf model)
>SRA1006567	Pro	TGG
                   t      ACac tcgaaatcct
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C T C T C     A
    C T G A        A      | + | | |     A
  C         T G C G       G G G A G     C
  G         | | | |                 T T
  G         A C G C
    T T A          G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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