The detailed information of tRNA gene sequence


Sequence ID>SRA1006569
Genome IDSRR020488.135205
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 99
End posion on genome 25
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttcaggattT
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGTAGAGCACCTGCATGGCATGCAGGGGGTCAGCGGTTCGAGT
CCGCTTGGCTCCATaa
Downstream region at tRNA end position 
ataattggat
Secondary structure (Cloverleaf model)
>SRA1006569	Ala	GGC
                   T      ATaa ataattggat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T G
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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