The detailed information of tRNA gene sequence


Sequence ID>SRA1006584
Genome IDSRR020488.142056
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 4
End posion on genome 80
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
nnnnnnntct
tRNA gene sequence 
GCGCCTGTAGCTCAGCTGGATAGAGCGTCTGGCTTCGAACCAGAAAGTCGGGAGTTCGAA
TCTTCCCAGGCGCACCA
Downstream region at tRNA end position 
ttttttatat
Secondary structure (Cloverleaf model)
>SRA1006584	Arg	TCG
                   t      ACCA ttttttatat
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C C T T C     A
      C G A        A      | | + | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AAGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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