The detailed information of tRNA gene sequence


Sequence ID>SRA1006598
Genome IDSRR020488.147959
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 27
End posion on genome 118
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaatatcat
tRNA gene sequence 
GGTGAGGTGGGTGAGCGGTTTAAACCAGAAGTTTGCTAAATTTCCGTAGGTGTAACAATC
TACCGTGGGTTCGAATCCCACCCTCACCGCCA
Downstream region at tRNA end position 
catttatcta
Secondary structure (Cloverleaf model)
>SRA1006598	Ser	GCT
                   t      GCCA catttatcta
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T G G       G T G G G     C
    G         | | |                 T T
    T       A A C C
      T T A        A     CGTAGGTGTAACAATCTACC
                    G - C
                    A - T
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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