The detailed information of tRNA gene sequence


Sequence ID>SRA1006611
Genome IDSRR020488.151564
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 264
End posion on genome 187
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ctacagttat
tRNA gene sequence 
GCTCCTATCGTCTAGCCTGGTCTAGGACTACGCGTTTTCATCGCGTCAACAGGGGTTCGA
ATCCCCTTGGGAGTGCCA
Downstream region at tRNA end position 
tattaaaaaa
Secondary structure (Cloverleaf model)
>SRA1006611	Glu	TTC
                   t      GCCA tattaaaaaa
                     G + T
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     T C C C C     A
    C C G A        C      | | | | |     G
  T         T C T G       A G G G G     C
  G         + | | |                 T T
  G         G G A C
    T C T A        T     CAAC
                    A - T
                    C - G
                    G - C
                    C - G
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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