The detailed information of tRNA gene sequence


Sequence ID>SRA1006634
Genome IDSRR020488.158232
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 22
End posion on genome 98
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atctttatgc
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTTAGAGCGCTGGCCTGTCACGCCAGAGGCCGCGAGTTCGAG
TCTCGTCACTCCCGCCA
Downstream region at tRNA end position 
tattaaatct
Secondary structure (Cloverleaf model)
>SRA1006634	Asp	GTC
                   c      GCCA tattaaatct
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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