The detailed information of tRNA gene sequence


Sequence ID>SRA1006643
Genome IDSRR020488.163465
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 192
End posion on genome 268
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttcgaaaatT
tRNA gene sequence 
GGTCTGGTAGTTCAGTTGGTTAGAATACATGCCTGTCACGCATGGGGGTCGCGGGTTCGA
GTCCCGTCCAGACCGGnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1006643	Asp	GTC
                   T      GGnn nnnnnnnnnn
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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