The detailed information of tRNA gene sequence


Sequence ID>SRA1006646
Genome IDSRR020488.165265
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 44
End posion on genome 121
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
taagattaaG
tRNA gene sequence 
GGGGATTAAGCTCAGACTGGGAGAGCGCCTGATTTGCATTCAGGAGGTCAGCGGTTCGAT
CCCGCTATCCTCCACCA
Downstream region at tRNA end position 
aaacacttnn
Secondary structure (Cloverleaf model)
>SRA1006646	Ala	TGC
                   G      ACCA aaacacttnn
                     G - C
                     G - C
                     G + T
                     G - C
                     A   C
                     T   T
                     T - A          C T
                    A     T C G C C     A
      A G A        A      | | | | |     G
    C       C T C G       A G C G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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