The detailed information of tRNA gene sequence


Sequence ID>SRA1006648
Genome IDSRR020488.166173
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 236
End posion on genome 150
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaatcaact
tRNA gene sequence 
GGAGAGTTGGCAGAGTGGTAATGCAGCGGATTGCTAATCCGTCATGGTGTAACAATCATG
CATGAGTTCAAATCTCATACTCTCCGCtc
Downstream region at tRNA end position 
ggaaaagaag
Secondary structure (Cloverleaf model)
>SRA1006648	Ser	GCT
                   t      GCtc ggaaaagaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T A C T C     A
        G A        G      | | | | |     A
      T     G A C G       A T G A G     C
      G       | | |                 T T
      G     A T G C
        T A        A     CATGGTGTAACAATCATGC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK